[Rmannounce] RepeatMasker Patch - Crossmatch 1.080812 Bugfix
Robert Hubley
rhubley at systemsbiology.org
Wed Jun 8 14:40:55 PDT 2011
We have a patch for recent versions of RepeatMasker 3.2.X and higher
which allows the program to work with the most-recent version of
Crossmatch ( 1.080812 ). Without this patch the program will
intermittently report "FastaDB::substr - Error index out of bounds! at
RepeatMasker line 4969" when used with this version of Crossmatch. The
patch is easy to apply. Simply replace the CrossmatchSearchEngine.pm
module in your RepeatMasker directory with this one:
http://www.repeatmasker.org/CrossmatchSearchEngine.pm
<http://www.repeatmasker.org/CrossmatchSearchEngine.pm>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://repeatmasker.systemsbiology.net/pipermail/rmannounce/attachments/20110608/f72af6ba/attachment.html
More information about the Rmannounce
mailing list